Molecular Modeling and Drug Design detailed syllabus for Pharmaceutical Technology (Pharma Tech) for 2019 regulation curriculum has been taken from the Anna Universities official website and presented for the Pharma Tech students. For course code, course name, number of credits for a course and other scheme related information, do visit full semester subjects post given below.
For Pharmaceutical Technology 5th Sem scheme and its subjects, do visit Pharma Tech 5th Sem 2019 regulation scheme. For Professional Elective-I scheme and its subjects refer to Pharma Tech Professional Elective-I syllabus scheme. The detailed syllabus of molecular modeling and drug design is as follows.
Course Objective:
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Unit I
Introduction To the Drug Discovery/Development
Definition and introduction to Drug Discovery, Stages of Drug Discovery, Strategic Issues in drug discovery and Development, Ligand sources – Natural, synthetic and semi -synthetics, Protein Structure Basics, Protein Databases, Structure file formats, Cheminformatics databases, Graphical and structure viewers.
Unit II
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Unit III
Molecular Modeling and Molecular Mechanics
Introduction to Molecular Modelling, Protein Secondary and Tertiary structure elements, Homology Modelling – steps to get a model, Refinement of the model, Empirical Force Fields for Molecular Mechanics: bond stretching, angle bending, torsion, improper torsion, Lennard-Jones potential and van der waals interactions.
Unit IV
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Unit V
Molecular Docking Methods
Introduction to Molecular docking, Structure Based methods to identify lead components, Denovo ligand design, Simulation and docking case studies.
Course Outcome:
For the complete syllabus, results, class timetable, and many other features kindly download the iStudy App
It is a lightweight, easy to use, no images, and no pdfs platform to make students’s lives easier..
Text Books:
- Andrew R. Leach “Molecular Modeling Principles and Applications”, 2nd Ed., Prentice Hall ,2009.
- J.M. Haile, ” Molecular Dynamics Simulation Elementary Methods “, John Wiley and Sons, 1997.
- Gale Rhodes , “Crystallography made crystal clear”, Academic Press Inc. 2012.
References:
- Jan H Jensen, “Molecular Modeling Basics”, CRC Press, 2010.
- Visualisation Tools : PyMol or VMD Manual, https://pymol.org
- GROMACS Manual, https://manual.gromacs.org
- AUTODOCK Manual, autodock.scripps.edu
For detailed syllabus of all the other subjects of Pharmaceutical Technology 5th Sem, visit Pharma Tech 5th Sem subject syllabuses for 2019 regulation.
For all Pharmaceutical Technology results, visit Anna University Pharma Tech all semester results direct link.