Basics of Bioinformatics Med Ele 5th Sem Syllabus for BE 2017 Regulation Anna Univ (Open Elective I) detail syllabus for Medical Electronics (Med Ele), 2017 regulation is collected from the Anna Univ official website and presented for students of Anna University. The details of the course are: course code (OBT552), Category (OE), Contact Periods/week (3), Teaching hours/week (3), Practical Hours/week (0). The total course credits are given in combined syllabus.
For all other med ele 5th sem syllabus for be 2017 regulation anna univ you can visit Med Ele 5th Sem syllabus for BE 2017 regulation Anna Univ Subjects. For all other Open Elective I subjects do refer to Open Elective I. The detail syllabus for basics of bioinformatics is as follows.
Unit I
Biological Data Acquisition
The form of biological information. Retrieval methods for DNA sequence, protein sequence and protein structure information
Unit II
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Unit III
Data Processing
Data – Access, Retrieval and Submission: Standard search engines; Data retrieval tools -Entrez, DBGET and SRS; Submission of (new and revised) data; Sequence Similarity Searches: Localversus global. Distance metrics. Similarity and homology. Scoring matrices.
Unit IV
Methods of Analysis
Dynamic programming algorithms, Needleman-wunsch and Smith-waterman. Heuristic Methods of sequence alignment,FASTA , and PSI BLAST. Multiple Sequence Alignment and software tools for pairwise and multiple sequence alignment;
Unit V
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Text Books:
- Introduction to Bioinformatics by Arthur K. Lesk , Oxford University Press.
- Algorithms on Strings, Trees and Sequences by Dan Gusfield, Cambridge University Press.
- Biological Sequence Analysis Probabilistic Models of proteins and nucleic acids by Durbin, S.Eddy, A.Krogh, G.Mitchison.
- Bioinformatics Sequence and Genome Analysis by David W. Mount, Cold Spring Harbor Laboratory Press.
- Beginning Perl for Bioinformatics: An introduction to Perl for Biologists by James Tindall, OReilley Media
References:
- Bioinformatics The Machine Learning Approach by Pierre Baldi and Soren Brunak.
For detail syllabus of all other subjects of BE Med Ele, 2017 regulation do visit Med Ele 5th Sem syllabus for 2017 Regulation.
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