{"id":7937,"date":"2019-12-15T03:40:06","date_gmt":"2019-12-15T03:40:06","guid":{"rendered":"https:\/\/www.inspirenignite.com\/vtu\/bioinformatics-bme-6th-sem-syllabus-for-vtu-be-2017-scheme-professional-elective-ii\/"},"modified":"2019-12-15T03:40:06","modified_gmt":"2019-12-15T03:40:06","slug":"bioinformatics-bme-6th-sem-syllabus-for-vtu-be-2017-scheme-professional-elective-ii","status":"publish","type":"post","link":"https:\/\/www.inspirenignite.com\/vtu\/bioinformatics-bme-6th-sem-syllabus-for-vtu-be-2017-scheme-professional-elective-ii\/","title":{"rendered":"Bioinformatics BME 6th Sem Syllabus for VTU BE 2017 Scheme (Professional Elective-II)"},"content":{"rendered":"<p>Bioinformatics detail syllabus for Biomedical Engineering (BME), 2017 scheme is taken from <a href=\"https:\/\/vtu.ac.in\/b-e-scheme-syllabus\/\" target=\"_blank\" rel=\"noopener\">VTU<\/a> official website and presented for VTU students. The course code (17BM653), and for exam duration, Teaching Hr\/week, Practical Hr\/week, Total Marks, internal marks, theory marks, duration and credits do visit complete sem subjects post given below.<\/p>\n<p>For all other bme 6th sem syllabus for be 2017 scheme vtu you can visit <a href=\"..\/bme-6th-sem-syllabus-for-be-2017-scheme-vtu\">BME 6th Sem syllabus for BE 2017 Scheme VTU Subjects<\/a>. For all other Professional Elective-II subjects do refer to <a href=\"..\/professional-elective-ii-bme-6th-sem-syllabus-for-vtu-be-2017-scheme\">Professional Elective-II<\/a>. The detail syllabus for bioinformatics is as follows.<\/p>\n<p><h4>Module 1 <\/h4>\n<p>Introduction To Bioinformatics: Introduction, dawn of sequencing, bioinformatics, biological sequence, genome projects, importance of bioinformatics, pattern recognition &amp; prediction, folding problem, role of chaperones, sequence analysis, homology &amp; analogy. Information Networks: Introduction, internet, computer network, facilities used on the internet, world wide web, web browsers, HTTP, HTML, &amp; URL, EMB net, NCBI, Bioinformatics Programme, Servers in India, virtual tourism. Text1:(Chapter1.1,1.2,1.3,1.4,1.5,1.6,1.7,1.8,1.9,1.10,1.11.), Chapter (2.1,2.2,2.3,2.4,2.5,2.6,2.7,2.8,2. 9,2.10, 2.11).\n<\/p>\n<p><h4>Module 2 <\/h4>\n<p>For complete syllabus and results, class timetable and more pls <a href=\"https:\/\/play.google.com\/store\/apps\/details?id=ini.istudy\" target=\"_blank\" rel=\"noopener\">download iStudy<\/a>. Its a light weight, easy to use, no images, no pdfs platform to make students life easier.<\/p>\n<p><h4>Module 3 <\/h4>\n<p>Pairwise Alignment Techniques: Introduction, database searching, alphabets and complexity, algorithms and programs, comparing two sequences-a simple case, sub-sequences, identity and similarity. The Dotplot, local and global similarity, global alignment-Needleman &amp;Wunsch algorithm, local alignment-Smith-Waterman algorithm, dynamic programming, pairwise database searching. Text 1: ( Chapter 6.1, 6.2,6.3,6.4,6.5,6.6,6.7,6.8,6.9,6.10,6.11,6.12,6.13 to 6.13.2).\n<\/p>\n<p><h4>Module 4 <\/h4>\n<p>Multiple Sequence Alignment: Introduction, goal of multiple sequence alignment &amp;definition, consequences, computational complexity, manual methods, simultaneous methods, progressive methods, databases of multiple alignments &amp; searching. Secondary Database Searching: Introduction to secondary database searching, why secondary databases &amp; its contents, regular expressions, fingerprints, blocks, hidden Markovmodels. Text 1: ( Chapter 7.1,7.2,7.3,7.4,7.5,7.6,7.7,7.8,7.9,7.10., Chapter 8.1,8.2,8.3 to 8.3.5).\n<\/p>\n<p><h4>Module 5 <\/h4>\n<p>For complete syllabus and results, class timetable and more pls <a href=\"https:\/\/play.google.com\/store\/apps\/details?id=ini.istudy\" target=\"_blank\" rel=\"noopener\">download iStudy<\/a>. Its a light weight, easy to use, no images, no pdfs platform to make students life easier.<\/p>\n<p><h4>Course Outcomes:<\/h4>\n<p> After studying this course, students will be able to:<\/p>\n<ol>\n<li>Apply the basic principles of biology, computer science &amp; mathematics to extract the information from large biological databases.<\/li>\n<li>Develop new algorithms and sequence analysis methods.<\/li>\n<li>Identify appropriate method for aligning sequences, visualizing and analyzing protein structures.<\/li>\n<li>Classify the secondary structure elements and modeling protein structures from sequence.<\/li>\n<li>Explain the language of structure-function relationships, information theory, gene expression and database queries.<\/li>\n<\/ol>\n<p><h4>Question paper pattern:<\/h4>\n<ul>\n<li>The question paper will have TEN questions.<\/li>\n<li>Each full question carry 16 marks.<\/li>\n<li>There will be TWO full questions (with maximum of THREE sub questions) from each module.<\/li>\n<li>Each full question will have questions covering all the topics under a module.<\/li>\n<li>The students will have to answer FIVE full questions, selecting ONE full question from each module.<\/li>\n<\/ul>\n<p><h4>Text Books:<\/h4>\n<ol>\n<li>Introduction to Bioinformatics &#8211; by T. K. Attwood &amp; D.J.ParrySmith, Pearson Education Low Price Edition, 2004.<\/li>\n<li>Fundamental Concepts &#8211; of Bioinformatics by Dan E. Krane &amp; Michael L. Raymer, Pearson Education Low Price Edition, 2004<\/li>\n<\/ol>\n<p><h4>Reference Books:<\/h4>\n<ol>\n<li>Bioinformatics &#8211; Concepts, Skills &amp; Applications by S.C.Rastogi, Namita Mendiratta &amp; Parag Rastogi, CBS Publications, 2004.<\/li>\n<li>Bioinformatics &#8211; by Andreas D. Boxevanies, Wiley Inderscience, 1998.<\/li>\n<li>Bioinformatics &#8211; Sequence and Genome Analysis by David W. Mount, Cold Spring Harbor, 2001.<\/li>\n<\/li>\n<\/ol>\n<p>For detail syllabus of all other subjects of BE Bme, 2017 regulation do visit <a href=\"..\/category\/bme+6th-sem\">Bme 6th Sem syllabus for 2017 Regulation<\/a>.<\/p>\n<p>Dont forget to <a href=\"https:\/\/play.google.com\/store\/apps\/details?id=ini.istudy\" target=\"_blank\" rel=\"noopener\">download iStudy<\/a> for latest syllabus and results, class timetable and more.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Bioinformatics detail syllabus for Biomedical Engineering (BME), 2017 scheme is taken from VTU official website and presented for VTU students. The course code (17BM653), and for exam duration, Teaching Hr\/week, [&hellip;]<\/p>\n","protected":false},"author":2298,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_bbp_topic_count":0,"_bbp_reply_count":0,"_bbp_total_topic_count":0,"_bbp_total_reply_count":0,"_bbp_voice_count":0,"_bbp_anonymous_reply_count":0,"_bbp_topic_count_hidden":0,"_bbp_reply_count_hidden":0,"_bbp_forum_subforum_count":0,"footnotes":""},"categories":[13],"tags":[],"class_list":["post-7937","post","type-post","status-publish","format-standard","hentry","category-bme"],"_links":{"self":[{"href":"https:\/\/www.inspirenignite.com\/vtu\/wp-json\/wp\/v2\/posts\/7937","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.inspirenignite.com\/vtu\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.inspirenignite.com\/vtu\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.inspirenignite.com\/vtu\/wp-json\/wp\/v2\/users\/2298"}],"replies":[{"embeddable":true,"href":"https:\/\/www.inspirenignite.com\/vtu\/wp-json\/wp\/v2\/comments?post=7937"}],"version-history":[{"count":0,"href":"https:\/\/www.inspirenignite.com\/vtu\/wp-json\/wp\/v2\/posts\/7937\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.inspirenignite.com\/vtu\/wp-json\/wp\/v2\/media?parent=7937"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.inspirenignite.com\/vtu\/wp-json\/wp\/v2\/categories?post=7937"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.inspirenignite.com\/vtu\/wp-json\/wp\/v2\/tags?post=7937"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}